Molecule record

4-amino-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one

C9H13N3O5

243.22 g/mol

Loading structure

Molecular properties

Formula
C9H13N3O5
Molar mass
243.22 g·mol−1
Exact mass
243.0855 Da
5
PubChem CID
6253

Functional groups

Alcohol
Alkane / alkyl carbon
Aromatic ring
Ether
Primary amine

Physical properties

No source-backed physical properties are curated for this molecule yet.

Common names and synonyms

  • 1-beta-D-Arabinofuranosylcytosine
  • 147-94-4
  • Alexan
  • Ara-C
  • Arabinocytidine
  • Arabitin
  • Aracytidine
  • Aracytin
Show all 24 synonyms
  • Aracytine
  • Arafcyt
  • Citarabina
  • Cytarabina
  • Cytarabinoside
  • Cytosar
  • Cytosar-U
  • Cytosine arabinoside
  • Cytosine beta-D-arabinofuranoside
  • DepoCyte
  • Depocyt
  • Erpalfa
  • Spongocytidine
  • Udicil
  • arabinocytosine
  • cytarabine

Structure identifiers

Canonical SMILES
Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)n1
Isomeric SMILES
C1=CN(C(=O)N=C1N)[C@H]2[C@H]([C@@H]([C@H](O2)CO)O)O
InChI
InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7+,8-/m1/s1
InChIKey
UHDGCWIWMRVCDJ-CCXZUQQUSA-N
PubChem CID
6253

Spectroscopy

Tabs appear only for spectra stored with clear provenance.

Open library
No redistributable or simulated spectroscopy record is attached yet.

Simulated NMR

On-demand educational prediction for 4-amino-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one; not experimental data.

Simulated EI mass spectrum

On-demand educational fragmentation for 4-amino-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one; not experimental data.

Sources

Molecule identity

Retrieved 8/20/2026. Reuse status is summarized by the badge; open the source for full details.

Open source record